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17 Article(s) on File
Page 1 of 1
The contribution of de novo coding mutations to autism spectrum disorder
Iossifov I,
ORoak BJ,
Sanders SJ,
Ronemus M,
Krumm N,
Levy D,
Stessman HA,
Witherspoon KT,
Vives L,
Patterson KE,
Smith JD,
Paeper B,
Nickerson DA,
Dea J,
Dong S,
Gonzalez LE,
Mandell JD,
Mane SM,
Murtha MT,
Sullivan CA,
Walker MF,
Waqar Z,
Wei L,
Willsey AJ,
Yamrom B,
Lee YH,
Grabowska E,
Dalkic E,
Wang Z,
Marks S,
Andrews P,
Leotta A,
Kendall J,
Hakker I,
Rosenbaum J,
Ma B,
Rodgers L,
Troge J,
Narzisi G,
Yoon S,
Schatz MC,
Ye K,
McCombie WR,
Shendure J,
Eichler EE,
State MW,
Wigler M

Nature
  515 (7526): 2160-U136; Nov 13 2014   NLM
[Abstract]
[DOI] [Full Text]

Accurate de novo and transmitted indel detection in exome-capture data using microassembly
Narzisi G,
ORawe JA,
Iossifov I,
Fang H,
Lee Yh,
Wang Z,
Wu Y,
Lyon GJ,
Wigler M,
Schatz MC

Nature Methods
  11 (10): 1033-1036; Oct 2014   NLM
[Abstract]
[DOI] [Full Text]

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
Brownstein CA,
Beggs AH,
Homer N,
Merriman B,
Yu TW,
Flannery KC,
Dechene ET,
Towne MC,
Savage SK,
Price EN,
Holm IA,
Luquette LJ,
Lyon E,
Majzoub J,
Neupert P,
McCallie D,
Szolovits P,
Willard HF,
Mendelsohn NJ,
Temme R,
Finkel RS,
Yum SW,
Medne L,
Sunyaev SR,
Adzhubey I,
Cassa CA,
de Bakker PI,
Duzkale H,
Dworzy Ski P,
Fairbrother W,
Francioli L,
Funke BH,
Giovanni MA,
Handsaker RE,
Lage K,
Lebo MS,
Lek M,
Leshchiner I,
Macarthur DG,
McLaughlin HM,
Murray MF,
Pers TH,
Polak PP,
Raychaudhuri S,
Rehm HL,
Soemedi R,
Stitziel NO,
Vestecka S,
Supper J,
Gugenmus C,
Klocke B,
Hahn A,
Schubach M,
Menzel M,
Biskup S,
Freisinger P,
Deng M,
Braun M,
Perner S,
Smith RJ,
Andorf JL,
Huang J,
Ryckman K,
Sheffield VC,
Stone EM,
Bair T,
Black-Ziegelbein EA,
Braun TA,
Darbro B,
Deluca AP,
Kolbe DL,
Scheetz TE,
Shearer AE,
Sompallae R,
Wang K,
Bassuk AG,
Edens E,
Mathews K,
Moore SA,
Shchelochkov OA,
Trapane P,
Bossler A,
Campbell CA,
Heusel JW,
Kwitek A,
Maga T,
Panzer K,
Wassink T,
Van Daele D,
Azaiez H,
Booth K,
Meyer N,
Segal MM,
Williams MS,
Tromp G,
White P,
Corsmeier D,
Fitzgerald-Butt S,
Herman G,
Lamb-Thrush D,
McBride KL,
Newsom D,
Pierson CR,
Rakowsky AT,
Maver A,
Lovre IL,
Palanda IA,
Peterlin B,
Torkamani A,
Wedell A,
Huss M,
Alexeyenko A,
Lindvall JM,
Magnusson M,
Nilsson D,
Stranneheim H,
Taylan F,
Gilissen C,
Hoischen A,
van Bon B,
Yntema H,
Nelen M,
Zhang W,
Sager J,
Zhang L,
Blair K,
Kural D,
Cariaso M,
Lennon GG,
Javed A,
Agrawal S,
Ng PC,
Sandhu KS,
Krishna S,
Veeramachaneni V,
Isakov O,
Halperin E,
Friedman E,
Shomron N,
Glusman G,
Roach JC,
Caballero J,
Cox HC,
Mauldin D,
Ament SA,
Rowen L,
Richards DR,
Lucas FA,
Gonzalez-Garay ML,
Caskey CT,
Bai Y,
Huang Y,
Fang F,
Zhang Y,
Wang Z,
Barrera J,
Garcia-Lobo JM,
Gonzalez-Lamuno D,
Llorca J,
Rodriguez MC,
Varela I,
Reese MG,
De La Vega FM,
Kiruluta E,
Cargill M,
Hart RK,
Sorenson JM,
Lyon GJ,
Stevenson DA,
Bray BE,
Moore BM,
Eilbeck K,
Yandell M,
Zhao H,
Hou L,
Chen X,
Yan X,
Chen M,
Li C,
Yang C,
Gunel M,
Li P,
Kong Y,
Alexander AC,
Albertyn ZI,
Boycott KM,
Bulman DE,
Gordon PM,
Innes AM,
Knoppers BM,
Majewski J,
Marshall CR,
Parboosingh JS,
Sawyer SL,
Samuels ME,
Schwartzentruber J,
Kohane IS,
Margulies DM

Genome Biology
  15 (3): R53; Mar 25 2014   NLM
[Abstract]
[DOI] [Full Text]

Role of pericytes in skeletal muscle regeneration and fat accumulation
Birbrair A,
Zhang T,
Wang ZM,
Messi ML,
Enikolopov GN,
Mintz A,
Delbono O

Stem Cells and Development
  22 (16): 2298-2314; Aug 15 2013   Elsevier
[DOI] [Full Text]

Skeletal muscle pericyte subtypes differ in their differentiation potential
Birbrair A,
Zhang T,
Wang ZM,
Messi ML,
Enikolopov GN,
Mintz A,
Delbono O

Stem Cell Research
  10 (1): 67-84; Jan 2013  
[Abstract]
[DOI] [Full Text]

Manipulation of PK-M mutually exclusive alternative splicing by antisense oligonucleotides
Wang Z,
Jeon HY,
Rigo F,
Bennett CF,
Krainer AR

Open Biol
  2 (10): 120133; Oct 2012   NLM
[Abstract]
[DOI] [Full Text]

Skeletal Muscle Neural Progenitor Cells Exhibit Properties of NG2-Glia
Birbrair A,
Zhang T,
Wang Z,
Messi ML,
Enikolopov GN,
Mintz A,
Delbono O

Experimental Cell Research
  (0): Sep 2012  
[Abstract]
[DOI] [Full Text]

Hybrid error correction and de novo assembly of single-molecule sequencing reads
Koren S,
Schatz MC,
Walenz BP,
Martin J,
Howard JT,
Ganapathy G,
Wang Z,
Rasko DA,
McCombie WR,
Jarvis ED,
Phillippy AM

Nat Biotechnol
  30 (7): 693-700; Jul 1 2012   Nlm
[Abstract]
[DOI] [Full Text]

De novo gene disruptions in children on the autistic spectrum
Iossifov I,
Ronemus M,
Levy D,
Wang Z,
Hakker I,
Rosenbaum J,
Yamrom B,
Lee YH,
Narzisi G,
Leotta A,
Kendall J,
Grabowska E,
Ma B,
Marks S,
Rodgers L,
Stepansky A,
Troge J,
Andrews P,
Bekritsky M,
Pradhan K,
Ghiban E,
Kramer M,
Parla J,
Demeter R,
Fulton LL,
Fulton RS,
Magrini VJ,
Ye K,
Darnell JC,
Darnell RB,
Mardis ER,
Wilson RK,
Schatz MC,
McCombie WR,
Wigler M

Neuron
  74 (2): 285-99; Apr 26 2012   Nlm
[Abstract]
[DOI] [Full Text]

Exon-centric regulation of pyruvate kinase M alternative splicing via mutually exclusive exons
Wang ZX,
Chatterjee D,
Jeon HY,
Akerman M,
Vander Heiden MG,
Cantley LC,
Krainer AR

Journal of Molecular Cell Biology
  4 (2): 79-87; Apr 2012  
[Abstract]
[DOI] [Full Text]

Nestin-GFP transgene reveals neural precursor cells in adult skeletal muscle
Birbrair A,
Wang ZM,
Messi ML,
Enikolopov GN,
Delbono O

PLoS ONE
  6 (2): Feb 2011   Elsevier PMC3033412
[Abstract]
[DOI]

The alternative splicing repressors hnRNP A1/A2 and PTB influence pyruvate kinase isoform expression and cell metabolism
Clower CV,
Chatterjee D,
Wang ZX,
Cantley LC,
Heiden MG,
Krainer AR

Proceedings of the National Academy of Sciences of the United States of America
  107 (5): 1894-1899; Feb 2 2010   PMCID: PMC2838216
[Abstract]
[DOI] [Full Text] [PDF]

Determination of enriched histone modifications in non-genic portions of the human genome
Rosenfeld JA,
Wang Z,
Schones DE,
Zhao K,
DeSalle R,
Zhang MQ

BMC Genomics
  10 (1): 143; Mar 31 2009   PMCID: PMC2667539
[Abstract]
[DOI] [Full Text] [PDF]

Combinatorial patterns of histone acetylations and methylations in the human genome
Wang Z,
Zang C,
Rosenfeld JA,
Schones DE,
Barski A,
Cuddapah S,
Cui K,
Roh TY,
Peng W,
Zhang MQ,
Zhao K

Nat Genet
  40 (7): 897-903; Jul 2008   PMCID: PMC2769248
[Abstract]
[DOI] [Full Text] [PDF]

Oxygenase Domain of Drosophila melanogaster Nitric Oxide Synthase: Unique Kinetic Parameters Enable a More Efficient NO Release
Ray SS,
Tejero J,
Wang ZQ,
Dutta T,
Bhattacharjee A,
Regulski MR,
Tully T,
Ghosh S,
Stuehr DJ

Biochemistry
  46 (42): 11857-11864; Oct 23 2007  
[Abstract]
[DOI] [Full Text] [PDF]

Leukemia proto-oncoprotein MLL forms a SET1-like histone methyltransferase complex with menin to regulate Hox gene expression
Yokoyama A,
Wang Z,
Wysocka J,
Sanyal M,
Aufiero DJ,
Kitabayashi I,
Herr W,
Cleary ML

Molecular and Cellular Biology
  24 (13): 5639-5649; Jul 2004  
[Abstract]
[Full Text]

Nuclear particles containing RNA polymerase III complexes associated with the junctional plaque protein plakophilin 2
Mertens C,
Hofmann I,
Wang ZX,
Teichmann M,
Chong SS,
Schnolzer M,
Franke WW

Proceedings of the National Academy of Sciences of the United States of America
  98 (14): 7795-7800; Jul 2001  
[Abstract]
[Full Text]


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