Cold Spring Harbor Library  CSHL: Home
   Home       Services       Archives       About Us   
 
CSHL Publication List
CSHL Authors Publications
Go back to Search Mode

          
Sort by   in order
8 Article(s) on File
Page 1 of 1
RNA maps reveal new RNA classes and a possible function for pervasive transcription
Kapranov P,
Cheng J,
Dike S,
Nix DA,
Duttagupta R,
Willingham AT,
Stadler PF,
Hertel J,
Hackermüller J,
Hofacker IL,
Bell I,
Cheung E,
Drenkow J,
Dumais E,
Patel S,
Helt G,
Ganesh M,
Ghosh S,
Piccolboni A,
Sementchenko V,
Tammana H,
Gingeras TR

Science
  316 (5830): 1484-1488; 2007  
[Abstract]
[DOI]

Biological function of unannotated transcription during the early development of Drosophila melanogaster
Manak JR,
Dike S,
Sementchenko V,
Kapranov P,
Biemar F,
Long J,
Cheng J,
Bell I,
Ghosh S,
Piccolboni A,
Gingeras TR

Nature Genetics
  38 (10): 1151-1158; 2006  
[Abstract]
[DOI] [Full Text]

Transcriptional landscape of the human and fly genomes: Nonlinear and multifunctional modular model of transcriptomes
Willingham AT,
Dike S,
Cheng J,
Manak JR,
Bell I,
Cheung E,
Drenkow J,
Dumais E,
Duttagupta R,
Ganesh M,
Ghosh S,
Helt G,
Nix D,
Piccolboni A,
Sementchenko V,
Tammana H,
Kapranov P,
Gingeras TR

  71 (0): 101-110; 2006  
[Abstract]
[Full Text]

Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution
Cheng J,
Kapranov P,
Drenkow J,
Dike S,
Brubaker S,
Patel S,
Long J,
Stern D,
Tammana H,
Helt G,
Sementchenko V,
Piccolboni A,
Bekiranov S,
Bailey DK,
Ganesh M,
Ghosh S,
Bell I,
Gerhard DS,
Gingeras TR

Science
  308 (5725): 1149-1154; 2005  
[Abstract]
[DOI]

Novel RNAs identified from a in-depth analysis of the transcriptome of human chromosomes 21 and 22
Kampa D,
Cheng J,
Kapranov P,
Yamanaka M,
Brubaker S,
Cawley S,
Drenkow J,
Piccolboni A,
Bekiranov S,
Helt G,
Tammana H,
Gingeras TR

Genome Research
  14 (3): 331-342; 2004  
[Abstract]
[DOI] [Full Text]

The ENCODE (ENCyclopedia of DNA Elements) Project
Feingold EA,
Good PJ,
Guyer MS,
Kamholz S,
Liefer L,
Wetterstrand K,
Collins FS,
Gingeras TR,
Kampa D,
Sekinger EA,
Cheng J,
Hirsch H,
Ghosh S,
Zhu Z,
Patel S,
Piccolboni A,
Yang A,
Tammana H,
Bekiranov S,
Kapranov P,
Harrison R,
Church G,
Struhl K,
Ren B,
Kim TH,
Barrera LO,
Qu C,
van Calcar S,
Luna R,
Glass CK,
Rosenfeld MG,
Guigo R,
Antonarakis SE,
Birney E,
Brent M,
Pachter L,
Reymond A,
Dermitzakis ET,
Dewey C,
Keefe D,
Denoeud F,
Lagarde J,
Ashurst J,
Hubbard T,
Wesselink JJ,
Castelo R,
Eyras E,
Myers RM,
Sidow A,
Batzoglou S,
Trinklein ND,
Hartman SJ,
Aldred SF,
Anton E,
Schroeder DI,
Marticke SS,
Nguyen L,
Schmutz J,
Grimwood J,
Dickson M,
Cooper GM,
Stone EA,
Asimenos G,
Brudno M,
Dutta A,
Karnani N,
Taylor CM,
Kim HK,
Robins G,
Stamatoyannopoulos G,
Stamatoyannopoulos JA,
Dorschner M,
Sabo P,
Hawrylycz M,
Humbert R,
Wallace J,
Yu M,
Navas PA,
McArthur M,
Noble WS,
Dunham I,
Koch CM,
Andrews RM,
Clelland GK,
Wilcox S,
Fowler JC,
James KD,
Groth P,
Dovey OM,
Ellis PD,
Wraight VL,
Mungall AJ,
Dhami P,
Fiegler H,
Langford CF,
Carter NP,
Vetrie D,
Snyder M,
Euskirchen G,
Urban AE,
Nagalakshmi U,
Rinn J,
Popescu G,
Bertone P,
Hartman S,
Rozowsky J,
Emanuelsson O,
Royce T,
Chung S,
Gerstein M,
Lian Z,
Lian J,
Nakayama Y,
Weissman S,
Stolc V,
Tongprasit W,
Sethi H,
Jones S,
Marra M,
Shin H,
Schein J,
Clamp M,
Lindblad-Toh K,
Chang J,
Jaffe DB,
Kamal M,
Lander ES,
Mikkelsen TS,
Vinson J,
Zody MC,
de Jong PJ,
Osoegawa K,
Nefedov M,
Zhu B,
Baxevanis AD,
Wolfsberg TG,
Crawford GE,
Whittle J,
Holt IE,
Vasicek TJ,
Zhou D,
Luo S,
Green ED,
Bouffard GG,
Margulies EH,
Portnoy ME,
Hansen NF,
Thomas PJ,
McDowell JC,
Maskeri B,
Young AC,
Idol JR,
Blakesley RW,
Schuler G,
Miller W,
Hardison R,
Elnitski L,
Shah P,
Salzberg SL,
Pertea M,
Majoros WH,
Haussler D,
Thomas D,
Rosenbloom KR,
Clawson H,
Siepel A,
Kent WJ,
Weng Z,
Jin S,
Halees A,
Burden H,
Karaoz U,
Fu Y,
Yu Y,
Ding C,
Cantor CR,
Kingston RE,
Dennis J,
Green RD,
Singer MA,
Richmond TA,
Norton JE,
Farnham PJ,
Oberley MJ,
Inman DR,
McCormick MR,
Kim H,
Middle CL,
Pirrung MC,
Fu XD,
Kwon YS,
Ye Z,
Dekker J,
Tabuchi TM,
Gheldof N,
Dostie J,
Harvey SC

Science
  306 (5696): 636-640; 2004  
[Abstract]
[DOI] [Full Text]

Global mapping of functionally-important and regulatory regions on human chromosomes 21 and 22 reveal novel regulatory networks in the human genome
Kampa D,
Kapranov P,
Cawley S,
Bekiranov S,
Ng HH,
Sekinger EA,
Piccolboni A,
Sementchenko V,
Cheng J,
Drenkow J,
Yamanaka M,
Patel S,
Brubaker S,
Tammana H,
Narayanan B,
Helt G,
Struhl K,
Gingeras TR

American Journal of Human Genetics
  73 (5): 185-185; Nov 2003  
[Full Text]

Hidden complexities of the human genome revealed by unbiased mapping of transcriptome
Kapranov P,
Cawley S,
Bekiranov S,
Ng HH,
Sekinger EA,
Kampa D,
Piccolboni A,
Sementchenko V,
Cheng J,
Drenkow J,
Yamanaka M,
Patel S,
Brubaker S,
Tammana H,
Narayanan B,
Helt G,
Struhl K,
Gingeras TR

American Journal of Human Genetics
  73 (5): 419-419; Nov 2003  
[Full Text]


Page 1 of 1

Go back to Search Mode


Last Updated: September, 2017
Most Recent Publications: Jan 13, 2015

© 2012   CSHL Library and Archives   1 Bungtown Rd.   Cold Spring Harbor, NY 11724   Library Information 516-367-6872
CSHL Home Intranet