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6 Article(s) on File
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Pattern discovery and cancer gene identification in integrated cancer genomic data
Mo Q,
Wang S,
Seshan VE,
Olshen AB,
Schultz N,
Sander C,
Powers RS,
Ladanyi M,
Shen R

Proceedings of the National Academy of Sciences of the United States of America
  110 (11): 4245-4250; Mar 12 2013  
[Abstract]
[DOI] [Full Text]

Testing and Validating High Throughput Genomic Analysis of FFPE Samples: Systematic Gene Expression Differences between Matched Frozen and FFPE Samples Due to Rapid mRNA Degradation Signals
Cabal R,
Khanin R,
Viali A,
Socci N,
Lucito R,
Olshen A,
Zhang J,
Gerald W,
Powers S,
Ladanyi M

Modern Pathology
  24 (0): 1875; Feb 2011  
[Full Text]

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications
Harris RA,
Wang T,
Coarfa C,
Nagarajan RP,
Hong C,
Downey SL,
Johnson BE,
Fouse SD,
Delaney A,
Zhao Y,
Olshen A,
Ballinger T,
Zhou X,
Forsberg KJ,
Gu J,
Echipare L,
OGeen H,
Lister R,
Pelizzola M,
Xi Y,
Epstein CB,
Bernstein BE,
Hawkins RD,
Ren B,
Chung WY,
Gu H,
Bock C,
Gnirke A,
Zhang MQ,
Haussler D,
Ecker JR,
Li W,
Farnham PJ,
Waterland RA,
Meissner A,
Marra MA,
Hirst M,
Milosavljevic A,
Costello JF

Nature Biotechnology
  28 (10): 1097-1105; 2010   PMCID: PMC2955169
[Abstract]
[DOI] [Full Text] [PDF]

Circular binary segmentation for the analysis of array-based DNA copy number data
Olshen AB,
Venkatraman ES,
Lucito R,
Wigler MH

Biostatistics
  5 (4): 557-572; Oct 2004  
[Abstract]
[DOI] [Full Text]

Representational oligonucleotide microarray analysis: A high-resolution method to detect genome copy number variation
Lucito R,
Healy J,
Alexander J,
Reiner A,
Esposito D,
Chi MY,
Rodgers L,
Brady A,
Sebat J,
Troge JE,
West JA,
Rostan S,
Nguyen KC,
Powers S,
Ye KQ,
Olshen A,
Venkatraman E,
Norton L,
Wigler MH

Genome Research
  13 (10): 2291-2305; Oct 2003  
[Abstract]
[DOI] [Full Text]

A high-resolution radiation hybrid map of the human genome draft sequence
Olivier M,
Aggarwal A,
Allen J,
Almendras AA,
Bajorek ES,
Beasley EM,
Brady SD,
Bushard JM,
Bustos VI,
Chu A,
Chung TR,
De Witte A,
Denys ME,
Dominguez R,
Fang NY,
Foster BD,
Freudenberg RW,
Hadley D,
Hamilton LR,
Jeffrey TJ,
Kelly L,
Lazzeroni L,
Levy MR,
Lewis SC,
Liu X,
Lopez FJ,
Louie B,
Marquis JP,
Martinez RA,
Matsuura MK,
Misherghi NS,
Norton JA,
Olshen A,
Perkins SM,
Perou AJ,
Piercy C,
Piercy M,
Qin F,
Reif T,
Sheppard K,
Shokoohi V,
Smick GA,
Sun WL,
Stewart EA,
Tejeda JF,
Tran NM,
Trejo T,
Vo NT,
Yan SC,
Zierten DL,
Zhao SY,
Sachidanandam R,
Trask BJ,
Myers RM,
Cox DR

Science
  291 (5507): 1298-+; Feb 2001  
[Abstract]
[Full Text]


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