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7 Article(s) on File
Page 1 of 1
Classification of current anticancer immunotherapies
Galluzzi L,
Vacchelli E,
Bravo-San Pedro J,
Buque A,
Senovilla L,
Baracco EE,
Bloy N,
Castoldi F,
Abastado J,
Agostinis P,
Apte RN,
Aranda F,
Ayyoub M,
Beckhove P,
Blay J,
Bracci L,
Caignard A,
Castelli C,
Cavallo F,
Celis E,
Cerundolo V,
Clayton A,
Colombo MP,
Coussens L,
Dhodapkar MV,
Eggermont AM,
Fearon DT,
Fridman WH,
Fucikova J,
Gabrilovich DI,
Galon J,
Garg A,
Ghiringhelli F,
Giaccone G,
Gilboa E,
Gnjatic S,
Hoos A,
Hosmalin A,
Jager D,
Kalinski P,
Karre K,
Kepp O,
Kiessling R,
Kirkwood JM,
Klein E,
Knuth A,
Lewis CE,
Liblau R,
Lotze MT,
Lugli E,
Mach J,
Mattei F,
Mavilio D,
Melero I,
Melief CJ,
Mittendorf EA,
Moretta L,
Odunsi A,
Okada H,
Palucka AK,
Peter ME,
Pienta KJ,
Porgador A,
Prendergast GC,
Rabinovich GA,
Restifo NP,
Rizvi N,
Sautes-Fridman C,
Schreiber H,
Seliger B,
Shiku H,
Silva-Santos B,
Smyth MJ,
Speiser DE,
Spisek R,
Srivastava PK,
Talmadge JE,
Tartour E,
Van Der Burg SH,
Van Den Eynde BJ,
Vile R,
Wagner H,
Weber JS,
Whiteside TL,
Wolchok JD,
Zitvogel L,
Zou W,
Kroemer G

Oncotarget
  (0): Dec 18 2014   Nlm
[Abstract]
[Full Text]

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
Brownstein CA,
Beggs AH,
Homer N,
Merriman B,
Yu TW,
Flannery KC,
Dechene ET,
Towne MC,
Savage SK,
Price EN,
Holm IA,
Luquette LJ,
Lyon E,
Majzoub J,
Neupert P,
McCallie D,
Szolovits P,
Willard HF,
Mendelsohn NJ,
Temme R,
Finkel RS,
Yum SW,
Medne L,
Sunyaev SR,
Adzhubey I,
Cassa CA,
de Bakker PI,
Duzkale H,
Dworzy Ski P,
Fairbrother W,
Francioli L,
Funke BH,
Giovanni MA,
Handsaker RE,
Lage K,
Lebo MS,
Lek M,
Leshchiner I,
Macarthur DG,
McLaughlin HM,
Murray MF,
Pers TH,
Polak PP,
Raychaudhuri S,
Rehm HL,
Soemedi R,
Stitziel NO,
Vestecka S,
Supper J,
Gugenmus C,
Klocke B,
Hahn A,
Schubach M,
Menzel M,
Biskup S,
Freisinger P,
Deng M,
Braun M,
Perner S,
Smith RJ,
Andorf JL,
Huang J,
Ryckman K,
Sheffield VC,
Stone EM,
Bair T,
Black-Ziegelbein EA,
Braun TA,
Darbro B,
Deluca AP,
Kolbe DL,
Scheetz TE,
Shearer AE,
Sompallae R,
Wang K,
Bassuk AG,
Edens E,
Mathews K,
Moore SA,
Shchelochkov OA,
Trapane P,
Bossler A,
Campbell CA,
Heusel JW,
Kwitek A,
Maga T,
Panzer K,
Wassink T,
Van Daele D,
Azaiez H,
Booth K,
Meyer N,
Segal MM,
Williams MS,
Tromp G,
White P,
Corsmeier D,
Fitzgerald-Butt S,
Herman G,
Lamb-Thrush D,
McBride KL,
Newsom D,
Pierson CR,
Rakowsky AT,
Maver A,
Lovre IL,
Palanda IA,
Peterlin B,
Torkamani A,
Wedell A,
Huss M,
Alexeyenko A,
Lindvall JM,
Magnusson M,
Nilsson D,
Stranneheim H,
Taylan F,
Gilissen C,
Hoischen A,
van Bon B,
Yntema H,
Nelen M,
Zhang W,
Sager J,
Zhang L,
Blair K,
Kural D,
Cariaso M,
Lennon GG,
Javed A,
Agrawal S,
Ng PC,
Sandhu KS,
Krishna S,
Veeramachaneni V,
Isakov O,
Halperin E,
Friedman E,
Shomron N,
Glusman G,
Roach JC,
Caballero J,
Cox HC,
Mauldin D,
Ament SA,
Rowen L,
Richards DR,
Lucas FA,
Gonzalez-Garay ML,
Caskey CT,
Bai Y,
Huang Y,
Fang F,
Zhang Y,
Wang Z,
Barrera J,
Garcia-Lobo JM,
Gonzalez-Lamuno D,
Llorca J,
Rodriguez MC,
Varela I,
Reese MG,
De La Vega FM,
Kiruluta E,
Cargill M,
Hart RK,
Sorenson JM,
Lyon GJ,
Stevenson DA,
Bray BE,
Moore BM,
Eilbeck K,
Yandell M,
Zhao H,
Hou L,
Chen X,
Yan X,
Chen M,
Li C,
Yang C,
Gunel M,
Li P,
Kong Y,
Alexander AC,
Albertyn ZI,
Boycott KM,
Bulman DE,
Gordon PM,
Innes AM,
Knoppers BM,
Majewski J,
Marshall CR,
Parboosingh JS,
Sawyer SL,
Samuels ME,
Schwartzentruber J,
Kohane IS,
Margulies DM

Genome Biology
  15 (3): R53; Mar 25 2014   NLM
[Abstract]
[DOI] [Full Text]

Assessment of transcript reconstruction methods for RNA-seq
Steijger T,
Abril JF,
Engström PG,
Kokocinski F,
Akerman M,
Alioto T,
Ambrosini G,
Antonarakis SE,
Behr J,
Bertone P,
Bohnert R,
Bucher P,
Cloonan N,
Derrien T,
Djebali S,
Du J,
Dudoit S,
Gerstein M,
Gingeras TR,
Gonzalez D,
Grimmond SM,
Guigó R,
Habegger L,
Harrow J,
Hubbard TJ,
Iseli C,
Jean G,
Kahles A,
Lagarde J,
Leng J,
Lefebvre G,
Lewis S,
Mortazavi A,
Niermann P,
Rätsch G,
Reymond A,
Ribeca P,
Richard H,
Rougemont J,
Rozowsky J,
Sammeth M,
Sboner A,
Schulz MH,
Searle SM,
Solorzano ND,
Solovyev V,
Stanke M,
Stevenson BJ,
Stockinger H,
Valsesia A,
Weese D,
White S,
Wold BJ,
Wu J,
Wu TD,
Zeller G,
Zerbino D,
Zhang MQ

Nature Methods
  10 (12): 1177-1184; Nov 2013  
[Abstract]
[DOI] [Full Text]

The tomato genome sequence provides insights into fleshy fruit evolution
Sato S,
Tabata S,
Hirakawa H,
Asamizu E,
Shirasawa K,
Isobe S,
Kaneko T,
Nakamura Y,
Shibata D,
Aoki K,
Egholm M,
Knight J,
Bogden R,
Li CB,
Shuang Y,
Xu X,
Pan SK,
Cheng SF,
Liu X,
Ren YY,
Wang J,
Albiero A,
Dal Pero F,
Todesco S,
Van Eck J,
Buels RM,
Bombarely A,
Gosselin JR,
Huang MY,
Leto JA,
Menda N,
Strickler S,
Mao LY,
Gao S,
Tecle IY,
York T,
Zheng Y,
Vrebalov JT,
Lee J,
Zhong SL,
Mueller LA,
Stiekema WJ,
Ribeca P,
Alioto T,
Yang WC,
Huang SW,
Du YC,
Zhang ZH,
Gao JC,
Guo YM,
Wang XX,
Li Y,
He J,
Li CY,
Cheng ZK,
Zuo JR,
Ren JF,
Zhao JH,
Yan LH,
Jiang HL,
Wang B,
Li HS,
Li ZJ,
Fu FY,
Chen BT,
Han B,
Feng Q,
Fan DL,
Wang Y,
Ling HQ,
Xue YB,
Ware D,
McCombie WR,
Lippman ZB,
Chia JM,
Jiang K,
Pasternak S,
Gelley L,
Kramer M,
Anderson LK,
Chang SB,
Royer SM,
Shearer LA,
Stack SM,
Rose JK,
Xu YM,
Eannetta N,
Matas AJ,
McQuinn R,
Tanksley SD,
Camara F,
Guigo R,
Rombauts S,
Fawcett J,
Van de Peer Y,
Zamir D,
Liang CB,
Spannagl M,
Gundlach H,
Bruggmann R,
Mayer K,
Jia ZQ,
Zhang JH,
Ye ZB,
Bishop GJ,
Butcher S,
Lopez-Cobollo R,
Buchan D,
Filippis I,
Abbott J,
Dixit R,
Singh M,
Singh A,
Pal JK,
Pandit A,
Singh PK,
Mahato AK,
Dogra V,
Gaikwad K,
Sharma TR,
Mohapatra T,
Singh NK,
Causse M,
Rothan C,
Schiex T,
Noirot C,
Bellec A,
Klopp C,
Delalande C,
Berges H,
Mariette J,
Frasse P,
Vautrin S,
Zouine M,
Latche A,
Rousseau C,
Regad F,
Pech JC,
Philippot M,
Bouzayen M,
Pericard P,
Osorio S,
del Carmen AF,
Monforte A,
Granell A,
Fernandez-Munoz R,
Conte M,
Lichtenstein G,
Carrari F,
De Bellis G,
Fuligni F,
Peano C,
Grandillo S,
Termolino P,
Pietrella M,
Fantini E,
Falcone G,
Fiore A,
Giuliano G,
Lopez L,
Facella P,
Perrotta G,
Daddiego L,
Bryan G,
Orozco M,
Pastor X,
Torrents D,
van Schriek K,
Feron RM,
van Oeveren J,
de Heer P,
daPonte L,
Jacobs-Oomen S,
Cariaso M,
Prins M,
van Eijk MJ,
Janssen A,
van Haaren MJ,
Jo SH,
Kim J,
Kwon SY,
Kim S,
Koo DH,
Lee S,
Hur CG,
Clouser C,
Rico A,
Hallab A,
Gebhardt C,
Klee K,
Jocker A,
Warfsmann J,
Gobel U,
Kawamura S,
Yano K,
Sherman JD,
Fukuoka H,
Negoro S,
Bhutty S,
Chowdhury P,
Chattopadhyay D,
Datema E,
Smit S,
Schijlen EW,
van de Belt J,
van Haarst JC,
Peters SA,
van Staveren MJ,
Henkens MH,
Mooyman PJ,
Hesselink T,
van Ham R,
Jiang GY,
Droege M,
Choi D,
Kang BC,
Kim BD,
Park M,
Yeom SI,
Lee YH,
Choi YD,
Li GC,
Gao JW,
Liu YS,
Huang SX,
Fernandez-Pedrosa V,
Collado C,
Zuniga S,
Wang GP,
Cade R,
Dietrich RA,
Rogers J,
Knapp S,
Fei ZJ,
White RA,
Thannhauser TW,
Giovannoni JJ,
Botella MA,
Gilbert L,
Gonzalez R,
Goicoechea JL,
Yu Y,
Kudrna D,
Collura K,
Wissotski M,
Wing R,
Schoof H,
Meyers BC,
Gurazada AB,
Green PJ,
Mathur S,
Vyas S,
Solanke AU,
Kumar R,
Gupta V,
Sharma AK,
Khurana P,
Khurana JP,
Tyagi AK,
Dalmay T,
Mohorianu I,
Walts B,
Chamala S,
Barbazuk WB,
Li JP,
Guo H,
Lee TH,
Wang YP,
Zhang D,
Paterson AH,
Wang XY,
Tang HB,
Barone A,
Chiusano ML,
Ercolano MR,
DAgostino N,
Di Filippo M,
Traini A,
Sanseverino W,
Frusciante L,
Seymour GB,
Elharam M,
Fu Y,
Hua A,
Kenton S,
Lewis J,
Lin SP,
Najar F,
Lai HS,
Qin BF,
Qu CM,
Shi RH,
White D,
White J,
Xing YB,
Yang KQ,
Yi J,
Yao ZY,
Zhou LP,
Roe BA,
Vezzi A,
DAngelo M,
Zimbello R,
Schiavon R,
Caniato E,
Rigobello C,
Campagna D,
Vitulo N,
Valle G,
Nelson DR,
De Paoli E,
Szinay D,
de Jong HH,
Bai YL,
Visser RG,
Lankhorst RM,
Beasley H,
McLaren K,
Nicholson C,
Riddle C,
Gianese G

Nature
  485 (7400): 635-641; May 2012  
[Abstract]
[DOI] [Full Text]

The Tuberous Sclerosis Complex-Mammalian Target of Rapamycin Pathway Maintains the Quiescence and Survival of Naive T Cells
Wu Q,
Liu Y,
Chen C,
Ikenoue T,
Qiao Y,
Li CS,
Li WQ,
Guan KL,
Zheng P

Journal of Immunology
  187 (3): 1106-1112; Aug 2011   PMC3151493
[Abstract]
[DOI]

A second generation human haplotype map of over 3.1 million SNPs
Frazer KA,
Ballinger DG,
Cox DR,
Hinds DA,
Stuve LL,
Gibbs RA,
Belmont JW,
Boudreau A,
Hardenbol P,
Leal SM,
Pasternak S,
Wheeler DA,
Willis TD,
Yu FL,
Yang HM,
Zeng CQ,
Gao Y,
Hu HR,
Hu WT,
Li CH,
Lin W,
Liu SQ,
Pan H,
Tang XL,
Wang J,
Wang W,
Yu J,
Zhang B,
Zhang QR,
Zhao HB,
Zhao H,
Zhou J,
Gabriel SB,
Barry R,
Blumenstiel B,
Camargo A,
Defelice M,
Faggart M,
Goyette M,
Gupta S,
Moore J,
Nguyen H,
Onofrio RC,
Parkin M,
Roy J,
Stahl E,
Winchester E,
Ziaugra L,
Altshuler D,
Shen Y,
Yao ZJ,
Huang W,
Chu X,
He YG,
Jin L,
Liu YF,
Shen YY,
Sun WW,
Wang HF,
Wang Y,
Xiong XY,
Xu L,
Waye MM,
Tsui SK,
Wong JT,
Galver LM,
Fan JB,
Gunderson K,
Murray SS,
Oliphant AR,
Chee MS,
Montpetit A,
Chagnon F,
Ferretti V,
Leboeuf M,
Olivier JF,
Phillips MS,
Roumy S,
Sallee C,
Verner A,
Hudson TJ,
Kwok PY,
Cai DM,
Koboldt DC,
Miller RD,
Pawlikowska L,
Taillon-Miller P,
Xiao M,
Tsui LC,
Mak W,
Song YQ,
Tam PK,
Nakamura Y,
Kawaguchi T,
Kitamoto T,
Morizono T,
Nagashima A,
Ohnishi Y,
Sekine A,
Tanaka T,
Tsunoda T,
Deloukas P,
Bird CP,
Delgado M,
Dermitzakis ET,
Gwilliam R,
Hunt S,
Morrison J,
Powell D,
Stranger BE,
Whittaker P,
Bentley DR,
Daly MJ,
de Bakker PI,
Barrett J,
Chretien YR,
Maller J,
McCarroll S,
Patterson N,
Peer I,
Price A,
Purcell S,
Richter DJ,
Sabeti P,
Saxena R,
Schaffner SF,
Sham PC,
Varilly P,
Stein LD,
Krishnan L,
Smith AV,
Tello-Ruiz MK,
Thorisson GA,
Chakravarti A,
Chen PE,
Cutler DJ,
Kashuk CS,
Lin S,
Abecasis GR,
Guan WH,
Li Y,
Munro HM,
Qin ZH,
Thomas DJ,
McVean G,
Auton A,
Bottolo L,
Cardin N,
Eyheramendy S,
Freeman C,
Marchini J,
Myers S,
Spencer C,
Stephens M,
Donnelly P,
Cardon LR,
Clarke G,
Evans DM,
Morris AP,
Weir BS,
Johnson TA,
Mullikin JC

Nature
  449 (7164): 851-U3; Oct 2007  
[Abstract]
[DOI] [Full Text] [PDF]

The map-based sequence of the rice genome
Matsumoto T,
Wu JZ,
Kanamori H,
Katayose Y,
Fujisawa M,
Namiki N,
Mizuno H,
Yamamoto K,
Antonio BA,
Baba T,
Sakata K,
Nagamura Y,
Aoki H,
Arikawa K,
Arita K,
Bito T,
Chiden Y,
Fujitsuka N,
Fukunaka R,
Hamada M,
Harada C,
Hayashi A,
Hijishita S,
Honda M,
Hosokawa S,
Ichikawa Y,
Idonuma A,
Iijima M,
Ikeda M,
Ikeno M,
Ito K,
Ito S,
Ito T,
Ito Y,
Iwabuchi A,
Kamiya K,
Karasawa W,
Kurita K,
Katagiri S,
Kikuta A,
Kobayashi H,
Kobayashi N,
Machita K,
Maehara T,
Masukawa M,
Mizubayashi T,
Mukai Y,
Nagasaki H,
Nagata Y,
Naito S,
Nakashima M,
Nakama Y,
Nakamichi Y,
Nakamura M,
Meguro A,
Negishi M,
Ohta I,
Ohta T,
Okamoto M,
Ono N,
Saji S,
Sakaguchi M,
Sakai K,
Shibata M,
Shimokawa T,
Song JY,
Takazaki Y,
Terasawa K,
Tsugane M,
Tsuji K,
Ueda S,
Waki K,
Yamagata H,
Yamamoto M,
Yamamoto S,
Yamane H,
Yoshiki S,
Yoshihara R,
Yukawa K,
Zhong HS,
Yano M,
Sasaki T,
Yuan QP,
Shu OT,
Liu J,
Jones KM,
Gansberger K,
Moffat K,
Hill J,
Bera J,
Fadrosh D,
Jin SH,
Johri S,
Kim M,
Overton L,
Reardon M,
Tsitrin T,
Vuong H,
Weaver B,
Ciecko A,
Tallon L,
Jackson J,
Pai G,
Van Aken S,
Utterback T,
Reidmuller S,
Feldblyum T,
Hsiao J,
Zismann V,
Iobst S,
de Vazeille AR,
Buell CR,
Ying K,
Li Y,
Lu TT,
Huang YC,
Zhao Q,
Feng Q,
Zhang L,
Zhu JJ,
Weng QJ,
Mu J,
Lu YQ,
Fan DL,
Liu YL,
Guan JP,
Zhang YJ,
Yu SL,
Liu XH,
Zhang Y,
Hong GF,
Han B,
Choisne N,
Demange N,
Orjeda G,
Samain S,
Cattolico L,
Pelletier E,
Couloux A,
Segurens B,
Wincker P,
DHont A,
Scarpelli C,
Weissenbach J,
Salanoubat M,
Quetier F,
Yu Y,
Kim HR,
Rambo T,
Currie J,
Collura K,
Luo MZ,
Yang TJ,
Ammiraju JS,
Engler F,
Soderlund C,
Wing RA,
Palmer LE,
de la Bastide M,
Spiegel L,
Nascimento L,
Zutavern T,
OShaughnessy A,
Dike S,
Dedhia N,
Preston R,
Balija V,
McCombie WR,
Chow TY,
Chen HH,
Chung MC,
Chen CS,
Shaw JF,
Wu HP,
Hsiao KJ,
Chao YT,
Chu MK,
Cheng CH,
Hour AL,
Lee PF,
Lin SJ,
Lin YC,
Liou JY,
Liu SM,
Hsing YI,
Raghuvanshi S,
Mohanty A,
Bharti AK,
Gaur A,
Gupta V,
Kumar D,
Ravi V,
Vij S,
Kapur A,
Khurana P,
Khurana JP,
Tyagi AK,
Gaikwad K,
Singh A,
Dalal V,
Srivastava S,
Dixit A,
Pal AK,
Ghazi IA,
Yadav M,
Pandit A,
Bhargava A,
Sureshbabu K,
Batra K,
Sharma TR,
Mohapatra T,
Singh NK,
Messing J,
Nelson AB,
Fuks G,
Kavchok S,
Keizer G,
Llaca EL,
Song RT,
Tanyolac B,
Young S,
Il KH,
Hahn JH,
Sangsakoo G,
Vanavichit A,
de Mattos LA,
Zimmer PD,
Malone G,
Dellagostin O,
de Oliveira AC,
Bevan M,
Bancroft I,
Minx P,
Cordum H,
Wilson R,
Cheng ZK,
Jin WW,
Jiang JM,
Leong SA,
Iwama H,
Gojobori T,
Itoh T,
Niimura Y,
Fujii Y,
Habara T,
Sakai H,
Sato Y,
Wilson G,
Kumar K,
McCouch S,
Juretic N,
Hoen D,
Wright S,
Bruskiewich R,
Bureau T,
Miyao A,
Hirochika H,
Nishikawa T

Nature
  436 (7052): 793-800; Aug 2005  
[Abstract]
[DOI] [Full Text] [PDF]


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